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Abstract

<jats:p>Homomorphic encryption (HE) enables computation on encrypted data and has emerged as a promising technology for privacy-preserving distributed analytics. However, the practical deployment of HE in large-scale hierarchical systems requires a thorough understanding of its computational overhead, scalability, and accuracy. This paper presents a generic hierarchical benchmarking framework for systematically evaluating homomorphic encryption schemes in multi-level aggregation environments. The framework supports configurable aggregation topologies, detailed operation-level profiling, and multiple encryption backends, enabling consistent and reproducible performance analysis across node-, cluster-, and global-level aggregation stages. Using the proposed framework, we conduct a comparative evaluation of the Brakerski/Fan-Vercauteren (BFV) and Cheon-Kim-Kim-Song (CKKS) schemes under identical workloads. Experimental results show that CKKS consistently outperforms BFV, achieving a 44.3% reduction in aggregation latency and a 24.6% reduction in decryption latency. {For the tested encoding and parameter settings,} CKKS delivers significantly lower numerical error, reducing the mean absolute error from 3.21 × 10−3 to 5.91 × 10−10. The proposed framework offers a reusable and extensible platform for evaluating emerging HE schemes and privacy-preserving analytics applications, thereby supporting future research and deployment of secure distributed data processing systems.</jats:p>

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Keywords

framework aggregation encryption schemes ckks

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